seg
seg
This module implements a data type seg for
representing line segments, or floating point intervals.
seg can represent uncertainty in the interval endpoints,
making it especially useful for representing laboratory measurements.
This module is considered trusted
, that is, it can be
installed by non-superusers who have CREATE privilege
on the current database.
Rationale
The geometry of measurements is usually more complex than that of a
point in a numeric continuum. A measurement is usually a segment of
that continuum with somewhat fuzzy limits. The measurements come out
as intervals because of uncertainty and randomness, as well as because
the value being measured may naturally be an interval indicating some
condition, such as the temperature range of stability of a protein.
Using just common sense, it appears more convenient to store such data
as intervals, rather than pairs of numbers. In practice, it even turns
out more efficient in most applications.
Further along the line of common sense, the fuzziness of the limits
suggests that the use of traditional numeric data types leads to a
certain loss of information. Consider this: your instrument reads
6.50, and you input this reading into the database. What do you get
when you fetch it? Watch:
test=> select 6.50 :: float8 as "pH";
pH
---
6.5
(1 row)
In the world of measurements, 6.50 is not the same as 6.5. It may
sometimes be critically different. The experimenters usually write
down (and publish) the digits they trust. 6.50 is actually a fuzzy
interval contained within a bigger and even fuzzier interval, 6.5,
with their center points being (probably) the only common feature they
share. We definitely do not want such different data items to appear the
same.
Conclusion? It is nice to have a special data type that can record the
limits of an interval with arbitrarily variable precision. Variable in
the sense that each data element records its own precision.
Check this out:
test=> select '6.25 .. 6.50'::seg as "pH";
pH
------------
6.25 .. 6.50
(1 row)
Syntax
The external representation of an interval is formed using one or two
floating-point numbers joined by the range operator (..
or ...). Alternatively, it can be specified as a
center point plus or minus a deviation.
Optional certainty indicators (<,
> or ~) can be stored as well.
(Certainty indicators are ignored by all the built-in operators, however.)
gives an overview of allowed
representations; shows some
examples.
In , x, y, and
delta denote
floating-point numbers. x and y, but
not delta, can be preceded by a certainty indicator.
seg External Representations
x
Single value (zero-length interval)
x .. y
Interval from x to y
x (+-) delta
Interval from x - delta to
x + delta
x ..
Open interval with lower bound x
.. x
Open interval with upper bound x
Because the ... operator is widely used in data sources, it is allowed
as an alternative spelling of the .. operator. Unfortunately, this
creates a parsing ambiguity: it is not clear whether the upper bound
in 0...23 is meant to be 23 or 0.23.
This is resolved by requiring at least one digit before the decimal
point in all numbers in seg input.
As a sanity check, seg rejects intervals with the lower bound
greater than the upper, for example 5 .. 2.
Precision
seg values are stored internally as pairs of 32-bit floating point
numbers. This means that numbers with more than 7 significant digits
will be truncated.
Numbers with 7 or fewer significant digits retain their
original precision. That is, if your query returns 0.00, you will be
sure that the trailing zeroes are not the artifacts of formatting: they
reflect the precision of the original data. The number of leading
zeroes does not affect precision: the value 0.0067 is considered to
have just 2 significant digits.
Usage
The seg module includes a GiST index operator class for
seg values.
The operators supported by the GiST operator class are shown in .
Seg GiST Operators
Operator
Description
seg << seg
boolean
Is the first seg entirely to the left of the second?
[a, b] << [c, d] is true if b < c.
seg >> seg
boolean
Is the first seg entirely to the right of the second?
[a, b] >> [c, d] is true if a > d.
seg &< seg
boolean
Does the first seg not extend to the right of the
second?
[a, b] &< [c, d] is true if b <= d.
seg &> seg
boolean
Does the first seg not extend to the left of the
second?
[a, b] &> [c, d] is true if a >= c.
seg = seg
boolean
Are the two segs equal?
seg && seg
boolean
Do the two segs overlap?
seg @> seg
boolean
Does the first seg contain the second?
seg <@ seg
boolean
Is the first seg contained in the second?
In addition to the above operators, the usual comparison
operators shown in are
available for type seg. These operators
first compare (a) to (c),
and if these are equal, compare (b) to (d). That results in
reasonably good sorting in most cases, which is useful if
you want to use ORDER BY with this type.
Notes
For examples of usage, see the regression test sql/seg.sql.
The mechanism that converts (+-) to regular ranges
isn't completely accurate in determining the number of significant digits
for the boundaries. For example, it adds an extra digit to the lower
boundary if the resulting interval includes a power of ten:
postgres=> select '10(+-)1'::seg as seg;
seg
---------
9.0 .. 11 -- should be: 9 .. 11
The performance of an R-tree index can largely depend on the initial
order of input values. It may be very helpful to sort the input table
on the seg column; see the script sort-segments.pl
for an example.
Credits
Original author: Gene Selkov, Jr. selkovjr@mcs.anl.gov,
Mathematics and Computer Science Division, Argonne National Laboratory.
My thanks are primarily to Prof. Joe Hellerstein
() for elucidating the
gist of the GiST (). I am
also grateful to all Postgres developers, present and past, for enabling
myself to create my own world and live undisturbed in it. And I would like
to acknowledge my gratitude to Argonne Lab and to the U.S. Department of
Energy for the years of faithful support of my database research.