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-rw-r--r--share/extensions/other/clipart/sources/reactome.py64
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diff --git a/share/extensions/other/clipart/sources/reactome.py b/share/extensions/other/clipart/sources/reactome.py
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+++ b/share/extensions/other/clipart/sources/reactome.py
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+#
+# Copyright 2021 Martin Owens <doctormo@gmail.com>
+#
+# This program is free software: you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation, either version 3 of the License, or
+# (at your option) any later version.
+#
+# This program is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+# GNU General Public License for more details.
+#
+# You should have received a copy of the GNU General Public License
+# along with this program. If not, see <http://www.gnu.org/licenses/>
+#
+"""
+Access Reactome Content Services.
+"""
+
+import re
+
+from import_sources import RemoteSource
+
+TAG_REX = re.compile(r'<[^<]+?>')
+
+class Reactome(RemoteSource):
+ name = 'Reactome (Bio)'
+ icon = 'sources/reactome.svg'
+ search_url = "https://reactome.org/ContentService/search/query"
+ file_url = "https://reactome.org/icon/{stId}.svg"
+ icon_url = "https://reactome.org/icon/{stId}.png"
+ all_licence = "cc-by-sa-4.0"
+
+ def search(self, query):
+ params = {
+ "query": query,
+ "types": "Icon",
+ "cluster": "true",
+ "Start row": 0,
+ "rows": 100,
+ }
+ response = {}
+ try:
+ response = self.session.get(self.search_url, params=params).json()
+ except Exception:
+ pass
+
+ if 'messages' in response and 'No entries' in response['messages'][0]:
+ return
+ for cats in response.get('results', []):
+ for entry in cats['entries']:
+ yield {
+ 'id': entry['dbId'],
+ 'name': TAG_REX.sub('', entry['name']),
+ 'author': 'Reactome/'+entry.get('iconDesignerName', "Unknown"),
+ 'summary': TAG_REX.sub('', entry.get('summation', '')),
+ 'created': None, # No data
+ 'popularity': 0, # No data
+ 'thumbnail': self.icon_url.format(**entry),
+ 'file': self.file_url.format(**entry),
+ 'license': self.all_licence,
+ }
+