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Diffstat (limited to '')
-rw-r--r-- | web/server/h2o/libh2o/deps/klib/test/kseq_test.c | 27 |
1 files changed, 27 insertions, 0 deletions
diff --git a/web/server/h2o/libh2o/deps/klib/test/kseq_test.c b/web/server/h2o/libh2o/deps/klib/test/kseq_test.c new file mode 100644 index 000000000..0304dea35 --- /dev/null +++ b/web/server/h2o/libh2o/deps/klib/test/kseq_test.c @@ -0,0 +1,27 @@ +#include <zlib.h> +#include <stdio.h> +#include "kseq.h" +KSEQ_INIT(gzFile, gzread) + +int main(int argc, char *argv[]) +{ + gzFile fp; + kseq_t *seq; + int l; + if (argc == 1) { + fprintf(stderr, "Usage: %s <in.fasta>\n", argv[0]); + return 1; + } + fp = gzopen(argv[1], "r"); + seq = kseq_init(fp); + while ((l = kseq_read(seq)) >= 0) { + printf("name: %s\n", seq->name.s); + if (seq->comment.l) printf("comment: %s\n", seq->comment.s); + printf("seq: %s\n", seq->seq.s); + if (seq->qual.l) printf("qual: %s\n", seq->qual.s); + } + printf("return value: %d\n", l); + kseq_destroy(seq); + gzclose(fp); + return 0; +} |