1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
|
/*------------------------------------------------------------------------
*
* geqo_pool.c
* Genetic Algorithm (GA) pool stuff
*
* Portions Copyright (c) 1996-2020, PostgreSQL Global Development Group
* Portions Copyright (c) 1994, Regents of the University of California
*
* src/backend/optimizer/geqo/geqo_pool.c
*
*-------------------------------------------------------------------------
*/
/* contributed by:
=*=*=*=*=*=*=*=*=*=*=*=*=*=*=*=*=*=*=*=*=*=*=*=*=*=*=*=*=*=*=*=*=*=*=
* Martin Utesch * Institute of Automatic Control *
= = University of Mining and Technology =
* utesch@aut.tu-freiberg.de * Freiberg, Germany *
=*=*=*=*=*=*=*=*=*=*=*=*=*=*=*=*=*=*=*=*=*=*=*=*=*=*=*=*=*=*=*=*=*=*=
*/
/* -- parts of this are adapted from D. Whitley's Genitor algorithm -- */
#include "postgres.h"
#include <float.h>
#include <limits.h>
#include <math.h>
#include "optimizer/geqo_copy.h"
#include "optimizer/geqo_pool.h"
#include "optimizer/geqo_recombination.h"
static int compare(const void *arg1, const void *arg2);
/*
* alloc_pool
* allocates memory for GA pool
*/
Pool *
alloc_pool(PlannerInfo *root, int pool_size, int string_length)
{
Pool *new_pool;
Chromosome *chromo;
int i;
/* pool */
new_pool = (Pool *) palloc(sizeof(Pool));
new_pool->size = (int) pool_size;
new_pool->string_length = (int) string_length;
/* all chromosome */
new_pool->data = (Chromosome *) palloc(pool_size * sizeof(Chromosome));
/* all gene */
chromo = (Chromosome *) new_pool->data; /* vector of all chromos */
for (i = 0; i < pool_size; i++)
chromo[i].string = palloc((string_length + 1) * sizeof(Gene));
return new_pool;
}
/*
* free_pool
* deallocates memory for GA pool
*/
void
free_pool(PlannerInfo *root, Pool *pool)
{
Chromosome *chromo;
int i;
/* all gene */
chromo = (Chromosome *) pool->data; /* vector of all chromos */
for (i = 0; i < pool->size; i++)
pfree(chromo[i].string);
/* all chromosome */
pfree(pool->data);
/* pool */
pfree(pool);
}
/*
* random_init_pool
* initialize genetic pool
*/
void
random_init_pool(PlannerInfo *root, Pool *pool)
{
Chromosome *chromo = (Chromosome *) pool->data;
int i;
int bad = 0;
/*
* We immediately discard any invalid individuals (those that geqo_eval
* returns DBL_MAX for), thereby not wasting pool space on them.
*
* If we fail to make any valid individuals after 10000 tries, give up;
* this probably means something is broken, and we shouldn't just let
* ourselves get stuck in an infinite loop.
*/
i = 0;
while (i < pool->size)
{
init_tour(root, chromo[i].string, pool->string_length);
pool->data[i].worth = geqo_eval(root, chromo[i].string,
pool->string_length);
if (pool->data[i].worth < DBL_MAX)
i++;
else
{
bad++;
if (i == 0 && bad >= 10000)
elog(ERROR, "geqo failed to make a valid plan");
}
}
#ifdef GEQO_DEBUG
if (bad > 0)
elog(DEBUG1, "%d invalid tours found while selecting %d pool entries",
bad, pool->size);
#endif
}
/*
* sort_pool
* sorts input pool according to worth, from smallest to largest
*
* maybe you have to change compare() for different ordering ...
*/
void
sort_pool(PlannerInfo *root, Pool *pool)
{
qsort(pool->data, pool->size, sizeof(Chromosome), compare);
}
/*
* compare
* qsort comparison function for sort_pool
*/
static int
compare(const void *arg1, const void *arg2)
{
const Chromosome *chromo1 = (const Chromosome *) arg1;
const Chromosome *chromo2 = (const Chromosome *) arg2;
if (chromo1->worth == chromo2->worth)
return 0;
else if (chromo1->worth > chromo2->worth)
return 1;
else
return -1;
}
/* alloc_chromo
* allocates a chromosome and string space
*/
Chromosome *
alloc_chromo(PlannerInfo *root, int string_length)
{
Chromosome *chromo;
chromo = (Chromosome *) palloc(sizeof(Chromosome));
chromo->string = (Gene *) palloc((string_length + 1) * sizeof(Gene));
return chromo;
}
/* free_chromo
* deallocates a chromosome and string space
*/
void
free_chromo(PlannerInfo *root, Chromosome *chromo)
{
pfree(chromo->string);
pfree(chromo);
}
/* spread_chromo
* inserts a new chromosome into the pool, displacing worst gene in pool
* assumes best->worst = smallest->largest
*/
void
spread_chromo(PlannerInfo *root, Chromosome *chromo, Pool *pool)
{
int top,
mid,
bot;
int i,
index;
Chromosome swap_chromo,
tmp_chromo;
/* new chromo is so bad we can't use it */
if (chromo->worth > pool->data[pool->size - 1].worth)
return;
/* do a binary search to find the index of the new chromo */
top = 0;
mid = pool->size / 2;
bot = pool->size - 1;
index = -1;
while (index == -1)
{
/* these 4 cases find a new location */
if (chromo->worth <= pool->data[top].worth)
index = top;
else if (chromo->worth == pool->data[mid].worth)
index = mid;
else if (chromo->worth == pool->data[bot].worth)
index = bot;
else if (bot - top <= 1)
index = bot;
/*
* these 2 cases move the search indices since a new location has not
* yet been found.
*/
else if (chromo->worth < pool->data[mid].worth)
{
bot = mid;
mid = top + ((bot - top) / 2);
}
else
{ /* (chromo->worth > pool->data[mid].worth) */
top = mid;
mid = top + ((bot - top) / 2);
}
} /* ... while */
/* now we have index for chromo */
/*
* move every gene from index on down one position to make room for chromo
*/
/*
* copy new gene into pool storage; always replace worst gene in pool
*/
geqo_copy(root, &pool->data[pool->size - 1], chromo, pool->string_length);
swap_chromo.string = pool->data[pool->size - 1].string;
swap_chromo.worth = pool->data[pool->size - 1].worth;
for (i = index; i < pool->size; i++)
{
tmp_chromo.string = pool->data[i].string;
tmp_chromo.worth = pool->data[i].worth;
pool->data[i].string = swap_chromo.string;
pool->data[i].worth = swap_chromo.worth;
swap_chromo.string = tmp_chromo.string;
swap_chromo.worth = tmp_chromo.worth;
}
}
|