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diff --git a/src/fluent-bit/lib/wasm-micro-runtime-WAMR-1.2.2/samples/workload/bwa/README.md b/src/fluent-bit/lib/wasm-micro-runtime-WAMR-1.2.2/samples/workload/bwa/README.md new file mode 100644 index 000000000..a8fbe3e69 --- /dev/null +++ b/src/fluent-bit/lib/wasm-micro-runtime-WAMR-1.2.2/samples/workload/bwa/README.md @@ -0,0 +1,46 @@ +"bwa" sample introduction +============== + +This sample demonstrates how to build [bwa](https://github.com/lh3/bwa) into +WebAssembly with simd support and run it with iwasm. + +## Preparation + +please refer to [installation instructions](../README.md). + +## Build + +``` shell +$ mkdir build && cd build +$ cmake .. +$ make +# to verify +$ ls bwa.wasm +``` + +## Download sample data + +Download the bwa-0.7.15 binary package from +[such an address](https://sourceforge.net/projects/bio-bwa/files/bwakit/bwakit-0.7.15_x64-linux.tar.bz2/download), +a sample data file named **hs38DH.fa** will be used later. + +If want more data, please refer to http://hgdownload.cse.ucsc.edu/goldenpath/hg19/bigZips/ + +## Run workload + +Firstly please build iwasm with simd support: + +``` shell +$ cd <wamr dir>/product-mini/platforms/linux/ +$ mkdir build && cd build +$ cmake .. +$ make +``` + +Then compile wasm file to aot file and run: + +``` shell +$ cd <wamr dir>/samples/workload/bwa/build +$ <wamr dir>/wamr-compiler/build/wamrc -o bwa.aot bwa.wasm +$ <wamr dir>/product-mini/platforms/linux/iwasm --dir=. bwa.aot index hs38DH.fa +``` |