diff options
Diffstat (limited to 'pre_commit/languages/r.py')
| -rw-r--r-- | pre_commit/languages/r.py | 11 |
1 files changed, 9 insertions, 2 deletions
diff --git a/pre_commit/languages/r.py b/pre_commit/languages/r.py index d573775..e034e39 100644 --- a/pre_commit/languages/r.py +++ b/pre_commit/languages/r.py @@ -8,6 +8,7 @@ from typing import Tuple from pre_commit.envcontext import envcontext from pre_commit.envcontext import PatchesT +from pre_commit.envcontext import UNSET from pre_commit.hook import Hook from pre_commit.languages import helpers from pre_commit.prefix import Prefix @@ -23,6 +24,7 @@ healthy = helpers.basic_healthy def get_env_patch(venv: str) -> PatchesT: return ( ('R_PROFILE_USER', os.path.join(venv, 'activate.R')), + ('RENV_PROJECT', UNSET), ) @@ -55,6 +57,10 @@ def _prefix_if_non_local_file_entry( return (path,) +def _rscript_exec() -> str: + return os.path.join(os.getenv('R_HOME', ''), 'Rscript') + + def _entry_validate(entry: Sequence[str]) -> None: """ Allowed entries: @@ -95,8 +101,9 @@ def install_environment( os.makedirs(env_dir, exist_ok=True) shutil.copy(prefix.path('renv.lock'), env_dir) shutil.copytree(prefix.path('renv'), os.path.join(env_dir, 'renv')) + cmd_output_b( - 'Rscript', '--vanilla', '-e', + _rscript_exec(), '--vanilla', '-e', f"""\ prefix_dir <- {prefix.prefix_dir!r} options( @@ -130,7 +137,7 @@ def install_environment( if additional_dependencies: with in_env(prefix, version): cmd_output_b( - 'Rscript', *RSCRIPT_OPTS, '-e', + _rscript_exec(), *RSCRIPT_OPTS, '-e', 'renv::install(commandArgs(trailingOnly = TRUE))', *additional_dependencies, cwd=env_dir, |